BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB035A12SP1|AL429992
(874 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1753 1722 0.0
>3x_Contig1753
Length = 23959
Score = 1722 bits (866), Expect = 0.0
Identities = 870/874 (99%)
Strand = Plus / Minus
Query: 1 gggcaagtgtatttttaggtggtatcatgctattgataggattyctaattggtgaaaggg 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 20658 gggcaagtgtatttttaggtggtatcatgctattgataggattcctaattggtgaaaggg 20599
Query: 61 aaaggcacgtcggcgatgttgttttgagaaatatagttgtygccttatgtttcctctttg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 20598 aaaggcacgtcggcgatgttgttttgagaaatatagttgtcgccttatgtttcctctttg 20539
Query: 121 tttcggtattctcttcatcattgtyatgcgctggctttatctatactaacgaaatcttac 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 20538 tttcggtattctcttcatcattgtcatgcgctggctttatctatactaacgaaatcttac 20479
Query: 181 cagaatccataaaatccgtggccttatcagtttgtatatcgacaagttggtttacagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20478 cagaatccataaaatccgtggccttatcagtttgtatatcgacaagttggtttacagggt 20419
Query: 241 ttgcccttgcattaatggcaccttatttaatgcaaatcgtagaatggtggaccttcgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20418 ttgcccttgcattaatggcaccttatttaatgcaaatcgtagaatggtggaccttcgtaa 20359
Query: 301 tgttgggaacatcaacaatagccttagctttcattataattatgtggtttcctgagacga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20358 tgttgggaacatcaacaatagccttagctttcattataattatgtggtttcctgagacga 20299
Query: 361 gagatttgtcaccacacgatattgacaatctattcaaacaagacgcgctgtcagcagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20298 gagatttgtcaccacacgatattgacaatctattcaaacaagacgcgctgtcagcagaag 20239
Query: 421 ttgaatatgaaaagatagagtcggatcaaagtgcagattttgaaagtattcccgagaggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20238 ttgaatatgaaaagatagagtcggatcaaagtgcagattttgaaagtattcccgagaggt 20179
Query: 481 ctggtgcgccagaacctgactcatttgtgtgtaccactactaccactgaagtgacggaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20178 ctggtgcgccagaacctgactcatttgtgtgtaccactactaccactgaagtgacggaac 20119
Query: 541 gttgaattattagtttagtcttgtttatctattgtacatattaaataatttactatttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20118 gttgaattattagtttagtcttgtttatctattgtacatattaaataatttactatttca 20059
Query: 601 taaactaagaataactttcaacactaaaaatctttgttctggaacatatgatgattttwa 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 20058 taaactaagaataactttcaacactaaaaatctttgttctggaacatatgatgattttaa 19999
Query: 661 atccttttcaaattatcagatgatcaacttaagcaattagcctcgcacgaatattcaata 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19998 atccttttcaaattatcagatgatcaacttaagcaattagcctcgcacgaatattcaata 19939
Query: 721 attgccgtatataactttcaattggagttgtttaattttaatgttgaatttgaatttcgt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19938 attgccgtatataactttcaattggagttgtttaattttaatgttgaatttgaatttcgt 19879
Query: 781 tcgtatataatctcggcttattaacttattaactttcatactaaactacccacttcattt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19878 tcgtatataatctcggcttattaacttattaactttcatactaaactacccacttcattt 19819
Query: 841 atatgaagtagaatattccaacaacataagatag 874
||||||||||||||||||||||||||||||||||
Sbjct: 19818 atatgaagtagaatattccaacaacataagatag 19785
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7277
Number of Sequences: 1807
Number of extensions: 7277
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 874
length of database: 10,358,551
effective HSP length: 16
effective length of query: 858
effective length of database: 10,329,639
effective search space: 8862830262
effective search space used: 8862830262
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)